In our FIM environment we want to retrieve the list of pending exports.  This is typically accomplished with a “csexport.exe MAName /f:x” command.  On my dev environment as a user with FIMSyncAdmins rights, the export is produced as expected.
  When I ran the command as a scheduled task I would receive this error message in our log file
     Microsoft Identity Integration Server Connector Space Export Utility v4.1.3419.0        
c 2012 Microsoft Corporation. All rights reserved
    Failed to export connector space.        
Error: <error>The Synchronization Service Manager service has stopped.</error>         
 
  It’s an odd message in that the Sync service was absolutely running.
  After making sure there was nothing wrong with the PowerShell script that was driving the command, I eventually tried elevating the service account to include local admin rights, and at that point it succeeded.
  From there I took a leap of faith that the Sync service account really was running, but under a non-admin scheduled task, it couldn’t see that the service was running for some reason.  Recalling the Service Control Manager hardening from Windows Server 2003 SP1, I was guessing the scheduled task couldn’t query the SCM.
  Sure enough, reviewing the default ACLs
     C:\Windows>sc sdshow FIMSynchronizationService
    D:(A;;CCLCSWRPWPDTLOCRRC;;;SY)(A;;CCDCLCSWRPWPDTLOCRSDRCWDWO;;;BA)(A;;CCLCSWLOCR        
RC;;;IU)(A;;CCLCSWLOCRRC;;;SU)S:(AU;FA;CCDCLCSWRPWPDTLOCRSDRCWDWO;;;WD)
 
  As an Interactive User (IU) you get read access to the service.  But as a scheduled task you don’t get the IU SID.  The solution is to grant the FIMSyncAdmins group read access to the service.
  With a small PowerShell script to determine the local group’s SID, we can update the SDDL for the service
     C:\Windows>sc sdset FIMSynchronizationService D:(A;;CCLCSWRPWPDTLOCRRC;;;SY)(A;;        
CCDCLCSWRPWPDTLOCRSDRCWDWO;;;BA)(A;;CCLCSWLOCRRC;;;IU)(A;;CCLCSWLOCRRC;;;S-1-5-2          
1-2974223652-3803999246-3267058373-1009)(A;;CCLCSWLOCRRC;;;SU)S:(AU;FA;CCDCLCSWR         
PWPDTLOCRSDRCWDWO;;;WD)         
[SC] SetServiceObjectSecurity SUCCESS
 
  And now CSExport works from a scheduled task.